Search lncRNAs

TCLA currently contains data from 13 cancer types of the TCGA studies. The raw data of each platform were retrieved from the TCGA Data Portal and the NCI's Cancer Genomics Hub (CGHub).



Explore the alteration of an individual lncRNA in transcriptional, genomic and epigenetic levels among human cancers by gene accession number from Ensembl (Version18; for example: search ENSG00000249859).

ENSG00000249859

Cancer Type	Expression		CNV		CAESLG
	Detectable	Dysregulated	Alteration	Focal alteration loci
BLCA	√	/	√	8q24.21(chr8:127333214-129789133):amplification	/
BRCA	√	Yes(Up)
COAD	√	Yes(Up)
GBM	√	/	√	8q24.21(chr8:127927022-131800277):amplification	/
HNSC	√
KIRC	√	Yes(Up)	√	8q24.22(chr8:101340214-146364022):amplification
LAML	√	/			/
LUAD	√	Yes(Up)
LUSC	√	Yes(Up)
OV	√	/	√	8q24.21(chr8:128494482-129683450):amplification	/
PRAD	√		√	8q21.3(chr8:60883302-146364022):amplification 8q24.21(chr8:76720721-146364022):amplification
SKCM	√	/	√	8q24.21(chr8:98814918-146364022):amplification	/
UCEC	√	/			/