TCDA Transcript fusion

  FCG

  Home

  PDGs

  Search

  Expression

  Copy Number

  Mutation

  Transcript Fusion

  Download

  Help

  About

Transcript Fusion

The transcript fusion data of TCGA were retrieved from the TumorFusions database.

List of the transcript fusions of the PDGs in each cancer type

Show entries each page Jump to page Total Page: 541 Total entries: 10811
Showing page 289	first page \| previous page \| next page \| last page

Cancer Type	TCGA_barcode	Patient	Fusion_transcript	Gene_A	Gene_B	Chr_A	Chr_B	Strand_A	Strand_B	#_Discordant_Pairs	#_JSR	#_perfect_JSR	Evalue	Junction_A	Junction_B	Tier	Frame	TN	WGS_validation	Centrality
PRAD	TCGA-EJ-7782-01A	TCGA-EJ-7782	P4HB\|NHP2L1	P4HB	NHP2L1	17	22	-1	-1	2	28	20	0.044	79801042	42071199	tier3	NA	12148	NA	0.367
PRAD	TCGA-EJ-7791-01A	TCGA-EJ-7791	P4HB\|NHP2L1	P4HB	NHP2L1	17	22	-1	-1	2	53	38	0.044	79801042	42071199	tier3	NA	12149	non-validated	0.367
PRAD	TCGA-HC-8256-01A	TCGA-HC-8256	P4HB\|SEC63	P4HB	SEC63	17	6	-1	-1	2	11	7	0.59	79801037	108214782	tier3	NA	12152	NA	0.36642
PRAD	TCGA-KK-A7AP-01A	TCGA-KK-A7AP	P4HB\|ZFP91	P4HB	ZFP91	17	11	-1	1	2	8	7	0.48	79801042	58380235	tier3	NA	12156	NA	0.37159
PRAD	TCGA-HC-7081-01A	TCGA-HC-7081	BRWD1\|RAPGEF4	BRWD1	RAPGEF4	21	2	-1	1	44	40	35	2	40670358	173913328	tier1	Out-of-frame	2236	NA	0.37324
LUAD	TCGA-05-4398-01A	TCGA-05-4398	BRWD1\|HUNK	BRWD1	HUNK	21	21	-1	1	2	2	2	0.08	40641825	33340562	tier3	Out-of-frame	2234	non-validated	0.38035
BRCA	TCGA-AC-A6IW-01A	TCGA-AC-A6IW	BRWD1\|ABCA10	BRWD1	ABCA10	21	17	-1	-1	2	3	2	0.24	40619627	67184020	tier2	Out-of-frame	2231	NA	0.36755
BRCA	TCGA-A2-A0CW-01A	TCGA-A2-A0CW	BRWD1\|DYRK1A	BRWD1	DYRK1A	21	21	-1	1	7	16	13	0.069	40581921	38844986	tier1	Out-of-frame	2233	NA	0.38298
BRCA	TCGA-E9-A1NF-01A	TCGA-E9-A1NF	BRWD1\|ABCG1	BRWD1	ABCG1	21	21	-1	1	4	2	2	0.46	40665737	43645781	tier1	In-frame	2232	NA	0.3695
BRCA	TCGA-A8-A08P-01A	TCGA-A8-A08P	BRWD1\|LCA5L	BRWD1	LCA5L	21	21	-1	-1	4	9	7	0.34	40585407	40801137	tier1	CDS-5UTR	2235	NA	0.36819
BRCA	TCGA-A8-A09Q-01A	TCGA-A8-A09Q	BRWD1\|WDR4	BRWD1	WDR4	21	21	-1	-1	2	5	5	0.98	40608521	44283706	tier3	Out-of-frame	2238	NA	0.36732
LUAD	TCGA-55-6987-01A	TCGA-55-6987	BRWD1\|SMC1A	BRWD1	SMC1A	21	X	-1	-1	5	3	2	0.11	40568424	53442118	tier1	In-frame	2237	NA	0.37726
PAAD	TCGA-3E-AAAY-01A	TCGA-3E-AAAY	BRWD1\|WRB	BRWD1	WRB	21	21	-1	1	2	2	2	0.061	40572145	40762624	tier3	Out-of-frame	2239	NA	0.36697
SKCM	TCGA-BF-A5EQ-01A	TCGA-BF-A5EQ	PRAME\|ACO2	PRAME	ACO2	22	22	-1	1	101	56	25	0.079	22899232	41903795	tier1	Out-of-frame	13483	NA	0.35318
SKCM	TCGA-EB-A3Y6-01A	TCGA-EB-A3Y6	PRAME\|HDLBP	PRAME	HDLBP	22	2	-1	-1	2	23	17	0.18	22890128	242202277	tier3	NA	13484	NA	0.36112
LUSC	TCGA-60-2722-01A	TCGA-60-2722	KCNQ5\|DST	KCNQ5	DST	6	6	1	-1	4	3	2	0.039	73332315	56342286	tier1	Out-of-frame	8609	non-validated	0.37588
SKCM	TCGA-EB-A6QY-01A	TCGA-EB-A6QY	KCNQ5\|ALK	KCNQ5	ALK	6	2	1	-1	7	5	3	0.035	73332315	29498362	tier1	In-frame	8606	NA	0.38637
BLCA	TCGA-DK-AA6T-01A	TCGA-DK-AA6T	KCNQ5\|CRYL1	KCNQ5	CRYL1	6	13	1	-1	5	4	3	1.3	73751785	21006435	tier1	Out-of-frame	8608	NA	0.36886
LUSC	TCGA-85-8354-01A	TCGA-85-8354	KCNQ5\|AMPH	KCNQ5	AMPH	6	7	1	-1	29	18	15	0.072	73815090	38433814	tier1	In-frame	8607	NA	0.37444
HNSC	TCGA-CQ-A4C7-01A	TCGA-CQ-A4C7	LAMP1\|CUL4A	LAMP1	CUL4A	13	13	1	1	75	30	2	1.2	113965182	113917801	tier1	Out-of-frame	9216	NA	0.3714

Showing page 289

first page | previous page | next page | last page

  TCGA

  GDC

  NCI