Mutation

 

The putative cancer-causing PDGs driven by somatic mutations were predicted by integration of five complementary methods to identify the genes with mutations that have significant signs of positive selection during tumor evolution.

 

List of the putative cancer-causing PDGs driven by somatic mutations in each cancer type


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 HGNC Symbol  Ensembl Gene ID  ACC  BLCA  BRCA  CESC  CHOL  COAD  DLBC  ESCA  GBM  HNSC  KICH  KIRC  KIRP  LAML  LGG  LIHC  LUAD  LUSC  MESO  OV  PAAD  PCPG  PRAD  READ  SARC  SKCM  STAD  TGCT  THCA  THYM  UCEC  UCS  UVM 
SLC45A2ENSG00000164175                                                                                                                                    
GPC4ENSG00000076716                                                                                                                                    
DBHENSG00000123454                                                                                                                                    
NTNG1ENSG00000162631                                                                                                                                    
SMPD1ENSG00000166311                                                                                                                                    
NEU1ENSG00000204386                                                                                                                                    
PON2ENSG00000105854                                                                                                                                    
SMPDL3BENSG00000130768                                                                                                                                    
F2ENSG00000180210                                                                                                                                    
IFI30ENSG00000216490                                                                                                                                    
ELANEENSG00000197561                                                                                                                                    
CNTN2ENSG00000184144                                                                                                                                    
TGFB1ENSG00000105329                                                                                                                                    
F5ENSG00000198734                                                                                                                                    
C4BPAENSG00000123838                                                                                                                                    
SCUBE1ENSG00000159307                                                                                                                                    
C4BPBENSG00000123843                                                                                                                                    
APOHENSG00000091583                                                                                                                                    
KNG1ENSG00000113889                                                                                                                                    
PDGFCENSG00000145431                                                                                                                                    

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