Mutation

 

The putative cancer-causing PDGs driven by somatic mutations were predicted by integration of five complementary methods to identify the genes with mutations that have significant signs of positive selection during tumor evolution.

 

List of the putative cancer-causing PDGs driven by somatic mutations in each cancer type


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 HGNC Symbol  Ensembl Gene ID  ACC  BLCA  BRCA  CESC  CHOL  COAD  DLBC  ESCA  GBM  HNSC  KICH  KIRC  KIRP  LAML  LGG  LIHC  LUAD  LUSC  MESO  OV  PAAD  PCPG  PRAD  READ  SARC  SKCM  STAD  TGCT  THCA  THYM  UCEC  UCS  UVM 
GP1BBENSG00000203618                                                                                                                                    
SLC2A11ENSG00000133460                                                                                                                                    
KCNJ4ENSG00000168135                                                                                                                                    
ATP2B2ENSG00000157087                                                                                                                                    
SLC6A1ENSG00000157103                                                                                                                                    
CHRNA9ENSG00000174343                                                                                                                                    
GABRG1ENSG00000163285                                                                                                                                    
GABRA4ENSG00000109158                                                                                                                                    
GABRB1ENSG00000163288                                                                                                                                    
EGFENSG00000138798                                                                                                                                    
GLRBENSG00000109738                                                                                                                                    
SLC6A19ENSG00000174358                                                                                                                                    
SLCO6A1ENSG00000205359                                                                                                                                    
GRIA1ENSG00000155511                                                                                                                                    
GABRA6ENSG00000145863                                                                                                                                    
GABRPENSG00000094755                                                                                                                                    
SLC17A1ENSG00000124568                                                                                                                                    
BTN1A1ENSG00000124557                                                                                                                                    
SLC44A4ENSG00000204385                                                                                                                                    
HLA-DQA2ENSG00000237541                                                                                                                                    

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