Mutation

 

The putative cancer-causing PDGs driven by somatic mutations were predicted by integration of five complementary methods to identify the genes with mutations that have significant signs of positive selection during tumor evolution.

 

List of the putative cancer-causing PDGs driven by somatic mutations in each cancer type


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 HGNC Symbol  Ensembl Gene ID  ACC  BLCA  BRCA  CESC  CHOL  COAD  DLBC  ESCA  GBM  HNSC  KICH  KIRC  KIRP  LAML  LGG  LIHC  LUAD  LUSC  MESO  OV  PAAD  PCPG  PRAD  READ  SARC  SKCM  STAD  TGCT  THCA  THYM  UCEC  UCS  UVM 
MAP3K7ENSG00000135341                                                                                                                                    
EPM2AENSG00000112425                                                                                                                                    
LRRC17ENSG00000128606                                                                                                                                    
BRAFENSG00000157764                      1            1                                1    1                    1            1    1        1        1          
CA2ENSG00000104267                                                                                                                                    
ATP6V0D2ENSG00000147614                                                                                                                                    
FBP2ENSG00000130957                                                                                                                                    
C9orf3ENSG00000148120                                                                                                                                    
ATP6V1G1ENSG00000136888                                                                                                                                    
HDAC8ENSG00000147099                                                                                                                                    
COL16A1ENSG00000084636                                                                                                                                    
MYSM1ENSG00000162601                                                                                                                                    
WARS2ENSG00000116874                                                                  1                                                                  
S100A13ENSG00000189171                                                                                                                                    
USP21ENSG00000143258                                                                                                                                    
YOD1ENSG00000180667                                                                                                                                    
LGALS8ENSG00000116977                                                                                                                                    
OR2L8ENSG00000196936                                                                                                                                    
PRAP1ENSG00000165828                                                                                                                                    
OR5D13ENSG00000198877                                                                                                                                    

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