Mutation
The putative cancer-causing PDGs driven by somatic mutations were predicted by integration of five complementary methods to identify the genes with mutations that have significant signs of positive selection during tumor evolution.
Summary of mutation frequency of the PDGs in each cancer type
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| HGNC Symbol | Ensembl Gene ID | ACC_Mut% | BLCA_Mut% | BRCA_Mut% | CESC_Mut% | CHOL_Mut% | COAD_Mut% | DLBC_Mut% | ESCA_Mut% | GBM_Mut% | HNSC_Mut% | KICH_Mut% | KIRC_Mut% | KIRP_Mut% | LAML_Mut% | LGG_Mut% | LIHC_Mut% | LUAD_Mut% | LUSC_Mut% | MESO_Mut% | OV_Mut% | PAAD_Mut% | PCPG_Mut% | PRAD_Mut% | READ_Mut% | SARC_Mut% | SKCM_Mut% | STAD_Mut% | TGCT_Mut% | THCA_Mut% | THYM_Mut% | UCEC_Mut% | UCS_Mut% | UVM_Mut% |
| OR4P4 | ENSG00000181927 | 0.00 | 1.78 | 0.31 | 0.36 | 0.00 | 1.29 | 0.00 | 1.66 | 1.29 | 0.80 | 0.00 | 0.27 | 0.00 | 1.47 | 0.98 | 0.28 | 2.64 | 4.29 | 0.00 | 0.49 | 0.00 | 0.00 | 0.81 | 0.00 | 0.00 | 2.37 | 1.90 | 0.00 | 0.20 | 0.00 | 1.11 | 0.00 | 0.00 |
| OR5W2 | ENSG00000187612 | 0.00 | 1.02 | 0.31 | 0.73 | 0.00 | 0.97 | 0.00 | 2.21 | 2.06 | 1.39 | 0.00 | 0.81 | 0.36 | 0.00 | 0.20 | 0.83 | 3.95 | 4.08 | 1.23 | 0.98 | 0.00 | 0.00 | 0.41 | 1.56 | 0.00 | 2.61 | 0.81 | 0.00 | 0.00 | 0.00 | 0.67 | 0.00 | 0.00 |
| OR10AG1 | ENSG00000174970 | 0.00 | 0.51 | 0.31 | 0.00 | 0.00 | 1.94 | 0.00 | 1.10 | 1.03 | 1.39 | 0.00 | 0.54 | 0.00 | 0.00 | 0.00 | 0.00 | 3.39 | 4.29 | 0.00 | 0.00 | 0.00 | 0.00 | 0.20 | 0.78 | 0.00 | 3.08 | 0.81 | 0.00 | 0.41 | 0.00 | 0.89 | 0.00 | 0.00 |
| OR5T2 | ENSG00000181718 | 0.00 | 0.51 | 0.31 | 1.09 | 0.00 | 1.94 | 2.70 | 1.10 | 0.26 | 1.20 | 0.00 | 0.27 | 0.71 | 0.00 | 0.00 | 1.11 | 3.95 | 3.22 | 0.00 | 0.98 | 0.00 | 0.00 | 0.20 | 0.00 | 0.86 | 4.50 | 2.44 | 0.00 | 0.41 | 0.00 | 1.11 | 0.00 | 0.00 |
| OR5M1 | ENSG00000255012 | 1.11 | 0.51 | 0.21 | 0.36 | 0.00 | 0.65 | 2.70 | 0.55 | 0.77 | 0.40 | 0.00 | 0.27 | 0.00 | 0.00 | 0.39 | 0.28 | 1.69 | 2.79 | 0.00 | 0.74 | 0.57 | 0.00 | 0.41 | 0.78 | 0.43 | 2.13 | 1.36 | 0.00 | 0.20 | 0.00 | 1.55 | 0.00 | 0.00 |
| P2RX3 | ENSG00000109991 | 0.00 | 0.76 | 0.10 | 0.00 | 0.00 | 0.32 | 0.00 | 0.55 | 0.00 | 0.60 | 0.00 | 0.27 | 0.00 | 0.00 | 0.00 | 0.56 | 0.75 | 0.64 | 0.00 | 0.74 | 0.00 | 0.00 | 0.00 | 0.78 | 0.43 | 1.66 | 0.27 | 0.00 | 0.00 | 0.00 | 1.33 | 0.00 | 1.25 |
| OR10Q1 | ENSG00000180475 | 1.11 | 0.51 | 0.41 | 0.36 | 0.00 | 0.32 | 0.00 | 0.00 | 0.26 | 0.60 | 0.00 | 0.00 | 0.36 | 0.00 | 0.39 | 0.56 | 3.39 | 4.51 | 0.00 | 0.49 | 0.57 | 0.00 | 0.61 | 0.00 | 0.86 | 3.32 | 0.27 | 0.00 | 0.00 | 0.00 | 0.67 | 0.00 | 0.00 |
| OR10W1 | ENSG00000172772 | 0.00 | 0.00 | 0.00 | 0.36 | 0.00 | 0.32 | 0.00 | 0.55 | 0.26 | 0.60 | 0.00 | 0.27 | 0.00 | 0.00 | 0.20 | 0.00 | 2.07 | 1.29 | 0.00 | 0.25 | 0.00 | 0.00 | 0.20 | 0.78 | 0.43 | 2.13 | 0.27 | 0.00 | 0.00 | 0.00 | 0.67 | 0.00 | 0.00 |
| OR5B2 | ENSG00000172365 | 0.00 | 0.25 | 0.10 | 0.00 | 0.00 | 0.32 | 0.00 | 1.10 | 0.00 | 0.20 | 0.00 | 0.00 | 0.00 | 0.74 | 0.00 | 0.00 | 2.26 | 3.22 | 0.00 | 0.74 | 0.00 | 0.00 | 0.20 | 0.78 | 0.43 | 1.42 | 1.08 | 0.00 | 0.20 | 0.00 | 0.22 | 0.00 | 0.00 |
| OR5A2 | ENSG00000172324 | 0.00 | 0.25 | 0.31 | 0.36 | 0.00 | 0.32 | 0.00 | 0.00 | 0.52 | 1.20 | 0.00 | 0.27 | 0.00 | 0.00 | 0.00 | 0.00 | 1.69 | 2.36 | 0.00 | 0.25 | 0.00 | 0.00 | 0.41 | 0.78 | 0.43 | 0.71 | 1.08 | 0.00 | 0.00 | 0.00 | 0.67 | 0.00 | 0.00 |
| OR4D6 | ENSG00000166884 | 0.00 | 0.51 | 0.31 | 0.00 | 0.00 | 0.65 | 2.70 | 0.00 | 0.77 | 1.00 | 0.00 | 0.54 | 0.00 | 0.00 | 0.39 | 0.28 | 2.07 | 3.22 | 1.23 | 0.74 | 0.00 | 0.00 | 0.20 | 0.78 | 0.00 | 1.42 | 0.54 | 0.00 | 0.00 | 0.00 | 0.44 | 0.00 | 0.00 |
| GPR152 | ENSG00000175514 | 0.00 | 0.51 | 0.00 | 0.00 | 0.00 | 0.32 | 0.00 | 0.00 | 0.00 | 0.40 | 0.00 | 0.27 | 0.36 | 0.00 | 0.00 | 0.56 | 1.13 | 0.64 | 0.00 | 0.25 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.18 | 0.81 | 0.00 | 0.00 | 0.00 | 0.89 | 0.00 | 0.00 |
| GPR83 | ENSG00000123901 | 0.00 | 0.51 | 0.31 | 0.00 | 0.00 | 0.32 | 0.00 | 1.66 | 0.77 | 0.20 | 0.00 | 0.27 | 0.36 | 0.00 | 0.20 | 0.56 | 1.88 | 1.07 | 0.00 | 0.00 | 0.57 | 0.00 | 0.41 | 1.56 | 0.43 | 2.13 | 1.08 | 0.00 | 0.00 | 0.00 | 0.44 | 0.00 | 1.25 |
| OR8D4 | ENSG00000181518 | 0.00 | 0.51 | 0.52 | 0.00 | 0.00 | 0.00 | 0.00 | 1.10 | 0.52 | 1.00 | 0.00 | 0.27 | 0.00 | 0.00 | 0.00 | 0.56 | 1.88 | 1.93 | 1.23 | 0.49 | 0.00 | 0.00 | 0.20 | 0.00 | 0.00 | 3.55 | 1.08 | 0.00 | 0.00 | 0.00 | 0.44 | 0.00 | 0.00 |
| OR10G4 | ENSG00000254737 | 1.11 | 0.25 | 0.62 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.26 | 1.20 | 0.00 | 0.81 | 0.00 | 0.00 | 0.20 | 0.00 | 2.07 | 3.43 | 0.00 | 0.49 | 0.00 | 0.00 | 0.00 | 1.56 | 0.00 | 2.13 | 0.54 | 0.00 | 0.20 | 0.00 | 0.89 | 0.00 | 1.25 |
| OR8D1 | ENSG00000196341 | 0.00 | 1.02 | 0.21 | 0.36 | 0.00 | 0.32 | 0.00 | 0.00 | 0.77 | 0.60 | 0.00 | 0.27 | 1.07 | 0.00 | 0.20 | 0.83 | 1.51 | 2.58 | 0.00 | 0.49 | 0.00 | 0.56 | 0.00 | 0.78 | 1.72 | 4.98 | 1.63 | 0.00 | 0.00 | 0.00 | 0.67 | 1.82 | 0.00 |
| OR8B12 | ENSG00000170953 | 0.00 | 1.53 | 0.21 | 1.09 | 0.00 | 0.00 | 0.00 | 0.55 | 0.00 | 0.60 | 0.00 | 0.54 | 0.00 | 0.74 | 0.00 | 0.00 | 1.32 | 1.93 | 0.00 | 0.49 | 1.15 | 0.00 | 0.00 | 0.00 | 0.00 | 1.90 | 0.27 | 0.00 | 0.00 | 0.83 | 0.44 | 0.00 | 0.00 |
| OR10AD1 | ENSG00000172640 | 0.00 | 0.25 | 0.10 | 0.00 | 0.00 | 0.00 | 2.70 | 0.00 | 0.00 | 0.40 | 0.00 | 0.00 | 0.36 | 0.00 | 0.20 | 0.00 | 0.38 | 0.64 | 0.00 | 0.25 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.47 | 0.54 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| GPR84 | ENSG00000139572 | 2.22 | 0.00 | 0.41 | 0.36 | 0.00 | 0.65 | 2.70 | 0.55 | 0.00 | 0.00 | 0.00 | 0.27 | 0.00 | 0.00 | 0.00 | 0.83 | 0.75 | 0.86 | 0.00 | 0.74 | 0.00 | 0.00 | 0.20 | 0.78 | 0.00 | 1.90 | 0.00 | 0.00 | 0.00 | 0.83 | 0.67 | 0.00 | 0.00 |
| OR9K2 | ENSG00000170605 | 1.11 | 0.25 | 0.10 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.03 | 0.60 | 0.00 | 0.00 | 0.00 | 0.00 | 0.20 | 0.28 | 1.13 | 2.15 | 0.00 | 0.25 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 3.55 | 0.00 | 0.00 | 0.00 | 0.00 | 0.89 | 1.82 | 0.00 |
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