Copy Number

 

The putative cancer-associated PDGs driven by SCNAs in each cancer type were identified by four criteria: 1) located in a peak region of a significantly recurrent focal SNCA locus estimated by the genomic identification of significant targets in cancer (GISTIC2) algorithm, (q≤0.25); 2) altered with high frequency and large amplitude (G-score ≥0.1); 3) mRNA reliably detected in at least 10% of tumor specimens in the given cancer type (90th percentile of FPKM value ≥1); and 4) mRNA significantly and positively correlated with copy numbers (Pearson P-value less than 0.001).

 

List of the putative cancer-causing PDGs driven by SCNAs in each cancer type


 Show   entries each page
 Jump to page  

 Total Page: 305 Total entries: 6083
 
 Showing page 22  first page | previous page | next page | last page 
 
KIRCKIRPKICHPRADBLCATHYMMESOLUADLUSCHNSCESCASTADCOADREADPAADLIHCCHOLACCPCPGTHCABRCAOVCESCUCECUCSSARCTGCTLAMLDLBCLGGGBMUVMSKCM
 HGNC Symbol  Ensembl Gene ID  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del  Amp  Del 
AMHENSG00000104899                                                                                                                                                                                                                                                                        
DKKL1ENSG00000104901                                                                                                                                                                                                                                                                        
RETNENSG00000104918                                                                                                                                                                                                                                                                        
FCER2ENSG00000104921                                                                                                                                                                                                                                                                        
LILRB1ENSG00000104972                                                                                                                                                                                                                                              1                          
LILRA1ENSG00000104974                                                                                                                                                                                                                                              1                          
CCNE1ENSG00000105173                                  1                        1        1                1        1                                1                1                        1        1                1                1                                                              
EBI3ENSG00000105246                                                                                                                                                                                                                                                                        
APLP1ENSG00000105290                                                                                                                                                                                                                                                                        
SIGLEC8ENSG00000105366                                                                                                                                                                                                                                                                        
CD79AENSG00000105369                                                                                                                                                                                                                                                                        
ICAM4ENSG00000105371                                                                                                                                                                                                                                                                        
CD33ENSG00000105383                                                                                                                                                                                                                                                                        
SULT2A1ENSG00000105398                                                                                                                                                                                                                                                                        
CLEC11AENSG00000105472                                                                                                                                                                                                                                                                        
CARD8ENSG00000105483                                                                                                                                                                              1                        1                                                                  
SIGLEC5ENSG00000105501                                                                                                                                                                                                                                                                        
FGF21ENSG00000105550                                                                                                                                                                                                                                                                        
LILRB5ENSG00000105609                                                                                                                                                                                                                                                                        
SLC5A5ENSG00000105641                                                                                                                                                                                                                                                                        

 Showing page 22 
first page | previous page | next page | last page 








Contact us | | Terms & Conditions.
Copyright © 2020 University of Pennsylvania. All Rights Reserved.